AT4G12780.2
|
Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 0.999 What is SUBAcon? |
|
||||||||||||||||||||||||||||
| Experimental Localisations and PPI |
|
||||||||||||||||||||||||||||
|
SUBAcon links
AGI-AGI relationships |
|
||||||||||||||||||||||||||||
| Description (TAIR10) | protein_coding : Chaperone DnaJ-domain superfamily protein | ||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
|||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: heat shock protein binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: Heat shock protein DnaJ, N-terminal (InterPro:IPR001623); BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT4G12770.1). | ||||||||||||||||||||||||||||
| Protein Annotations |
|
||||||||||||||||||||||||||||
| Coordinates (TAIR10) | chr4:+:7512200..7516655 | ||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 98989.90 Da | ||||||||||||||||||||||||||||
| IEP (calculated) | 7.06 | ||||||||||||||||||||||||||||
| GRAVY (calculated) | -1.01 | ||||||||||||||||||||||||||||
| Length | 894 amino acids | ||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MDDFTGLLAR DFGLKPQGKS APMASQSNSS AADFNTFASS YSFATAAGKK SDSLPVFDDP GRDGDDLLFK DVFSGPPPPK YGSSSGDSRS PSAPAFDYDA 101: MFKEPKSKSA SSMPVYDKPV YDDEDVFESI PELKIPSTSS QSARFENVFS SISSSPTKHR KQNSSPFDDL MGNNLGKKGA DSDREEKGSS IFDDLIPGFG 201: RTSSPPSKRT TSETTNQSEK APYRTAETSS NVEEDPFVVL EESESTPREP SRTDPLDDIG KPGPDMNSKG KSHLRPPGNI SGSQSPPVES PGSYHSKKVS 301: FEDFLEPHNM STPPPTNSNG SFESSDDVWL TVSEIPLFTQ PTSAPPPTRP PPPRPTRPIK KKVNEPSIPT SAYHSHVPSS GRASVNSPTA SQMDELDDFS 401: IGRNQTAANG YPDPSSGEDS DVFSTAAASA AAMKDAMDKA EAKFRHAKER REKENLKASR SREGDHTENY DSRERELREK QVRLDRERAE REAEMEKAQE 501: REKEEREREQ KRIERERERL VARQAVERAT REARERAATE AHAKVQRAAV GKATDARERA ERAAVQRAHA EARERAAAGA RDKAAKAAAE AREKAEKAAA 601: EAKERANAEA REKETRVRAE RAAVERAAAE ARGRAAAQAK AKQQQENTND LDSFFSSISR PNSAPRQRTN PLDPFQDSWN KGGSFESSRE SLRVPPGQPE 701: NLRKTSSVTN IVDDLSSIFG ASASQSGGFQ DVDGETEERR RARLERHQRT QERAAKALAE KNERDLQVQR EQVEKDNKKL RHLSILSHCF FPFRIGVTLD 801: VEIKRWGAGK EGNLRALLST LQYVLWPECG WQPVSLTDLI TAASVKKVYR KATLCIHPDK VQQKGANLQQ KYIAEKVFDM LKEAWNKFNS EELF |
||||||||||||||||||||||||||||
| See Also |
|
||||||||||||||||||||||||||||
Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)