AT4G12280.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.756 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : copper amine oxidase family protein | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
copper amine oxidase family protein; FUNCTIONS IN: primary amine oxidase activity, quinone binding, copper ion binding; INVOLVED IN: oxidation reduction, amine metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Copper amine oxidase (InterPro:IPR000269), Copper amine oxidase, C-terminal (InterPro:IPR015798); BEST Arabidopsis thaliana protein match is: Copper amine oxidase family protein (TAIR:AT4G12290.1); Has 1450 Blast hits to 1448 proteins in 272 species: Archae - 14; Bacteria - 373; Metazoa - 250; Fungi - 447; Plants - 222; Viruses - 0; Other Eukaryotes - 144 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:+:7301769..7302994 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 33967.10 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 5.66 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.54 | ||||||||||||||||||||||||||||||||||||||||
| Length | 300 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: METPLREVRP KVTLVVRMVA SVGNYDYIID YEFQTDGVMR AKVGLSGMLM VKGTTYENKN QVKKDKEGNE EELYGTILSE NVIGVIHDHY VTFYLDLDVD 101: GPDNSFVKVN LKRQETAPGE SPRKSYMKAV RNIVKTEKDG QIKLSLYDPS EYHVINPGKT TRVGNPTGYK VVPRATAASL LDHDDPPQKR GAFTNNQIWV 201: TPYNKSEQWA SGLFTYQSHG DDTLAVWSDR DRDIENKDIV VWYTLGFHHI PCQEDFPIMP TVSSSFDLKP VNFFERNPIL KAAPNFEYDL PVCGAKSDSA |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)