AT4G11745.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.794 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Galactose oxidase/kelch repeat superfamily protein | ||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Galactose oxidase/kelch repeat superfamily protein; CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch related (InterPro:IPR013089), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT4G11770.1); Has 1087 Blast hits to 1039 proteins in 91 species: Archae - 4; Bacteria - 51; Metazoa - 373; Fungi - 2; Plants - 634; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). | ||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:-:7075826..7076680 | ||||||||||||||||||||||||
| Molecular Weight (calculated) | 32573.60 Da | ||||||||||||||||||||||||
| IEP (calculated) | 7.44 | ||||||||||||||||||||||||
| GRAVY (calculated) | 0.07 | ||||||||||||||||||||||||
| Length | 284 amino acids | ||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MVHFAIIDEK LLVSVPIRNY CPRFGLKNII TLGSNIYMIG EFSSTVFFMD CRSHTWHEGP GMQVAAKYNE VSVLDGKIYV VERCKVSVSS NLIQVFDPKT 101: QIWECVASPS TGIRGRFGLN SLAIDGKLYL FGDKNLVYKP KEKTWDVVGF EINFHWIPHD SFCVIDKVII YYYNRHSRLL EWYDPEGSSW GILNGLEELL 201: PKLPRVLVSR HVRLVDYGGK VAIFWEKEVR PLIGYNKITI WCAEIALERR NAQEIYGKIE WCNVVLTLPS SCSIDELNAV SIIV |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)