AT4G11730.1
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:plasma membrane 1.000 ASURE: plasma membrane What is SUBAcon? |
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Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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Description (TAIR10) | protein_coding : Cation transporter/ E1-E2 ATPase family protein | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
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Computational Description (TAIR10) |
Cation transporter/ E1-E2 ATPase family protein; FUNCTIONS IN: ATPase activity; INVOLVED IN: cation transport, ATP biosynthetic process; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: ATPase, P-type cation exchange, alpha subunit (InterPro:IPR006069), ATPase, P-type cation-transporter, N-terminal (InterPro:IPR004014), ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type, plasma-membrane proton-efflux (InterPro:IPR006534), ATPase, P-type phosphorylation site (InterPro:IPR018303); BEST Arabidopsis thaliana protein match is: H(+)-ATPase 3 (TAIR:AT5G57350.2); Has 44930 Blast hits to 32175 proteins in 3165 species: Archae - 885; Bacteria - 29187; Metazoa - 4916; Fungi - 3187; Plants - 2417; Viruses - 6; Other Eukaryotes - 4332 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Protein Annotations |
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Coordinates (TAIR10) | chr4:+:7067035..7070968 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Molecular Weight (calculated) | 90444.20 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
IEP (calculated) | 6.79 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
GRAVY (calculated) | 0.19 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Length | 813 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: MATGDSLEDI KIEIDDDLEK IPIEEVFKKL RCSREGLSGA EGKERLKIFG PNKLENKKKE HITLRFFALM FKPLSWVIQA AAIMAMLFAN GDGRQLFLGI 101: VCLLIVNTII CYLKEDDAAN VVAMARAGLS PKTKVLRDGK WSEQEASILV PGDIVSIKPG DIIPCDARLL EGDTLKVDQS ALTGEFGPIT KGPGEEVFSG 201: TTCKQGEMEA VVIATGVHTF SGTTAHLVDN RTNKVGHFRK VVTEIENLCV ISIAIGISIE VIVMYWIQRR NFSDVINNLL VLVIGGIPLA MPTVLYVIMV 301: TGSLRLYRTG TITQRITAIE DMAAIDVLCS DKTGTLTLNK LSVDKNLIKV YSKDVEKEQV LLLAARASRI ENRDGIDAAM VGSLADPKEA RAGIREVHFN 401: LVDKRTALTY IDGNGDWHRV SKGTPEQILD LCNARDDLRK SVHSAIRNYA ERGLKSFAIS WFRNTNCNTV FFFPYQLCSE HKYHIVNKLQ ERHICGLIGD 501: GVDDVPSLKK ADVGIAVANA TEAARAASDI VLTEPGLSVI IDAVLASRAI LQQMKHYTIY AVSITIRVVF GFMFIALIWK FDFSPFMVLA IALLNEETTK 601: AITMDNVTNP SPTPDSLKLK EIFATGVVYG SYMALITVVF FWAAYRTDIF PRTFHVRDLR GNEAEMMCAL YLQVSIMSQA LFFVIQSRSW FFVERPGELL 701: FLSFVTVQTI ATTLAVYASW ETARIEGIGW SWAGVIWLYN IIFFFPLDIM KFGIRYILTG KAQSLFDNMV HLVLNSYAKL SNGIYNHTQA DHTYSLLEVS 801: TPPSQDLRGV GWV |
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See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)