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AT4G10860.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
cytosol 0.998
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G10880.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
DNASU:826683EMBL:AF080118EMBL:AL049525EMBL:AL161518
EMBL:CP002687EMBL:DQ446817EnsemblPlants:AT4G10860EnsemblPlants:AT4G10860.1
entrez:826683GeneID:826683Gramene:AT4G10860.1KEGG:ath:AT4G10860
ncoils:CoilPhylomeDB:O81627PIR:T01890Proteomes:UP000006548
RefSeq:NP_192824.1STRING:3702.AT4G10860.1TAIR:AT4G10860UniGene:At.65353
UniProt:O81627
Coordinates (TAIR10) chr4:-:6678900..6679436
Molecular Weight (calculated) 20140.30 Da
IEP (calculated) 4.74
GRAVY (calculated) -0.76
Length 178 amino acids
Sequence (TAIR10)
(BLAST)
001: MAPLLHQVSN YGYGKCVTVR FCDGKTYDAK DGESRAINRD LNVGAVKIYR DSKDEDQAYV LNYFPYNLEL NDNRGKNKGL QGYRVLIWKQ YGTINLDVFY
101: DEMKIWCKTN DLGIYTSDGE LKYYKSVIAR HREEGGISVI GFETAEGATT AAAKKEEDEN EEASAKVKEA NEEESTNA
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)