AT4G10650.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.996 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : P-loop containing nucleoside triphosphate hydrolases superfamily protein | ||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: GTP binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: GTP-binding protein, HSR1-related (InterPro:IPR002917); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT2G41670.1); Has 3555 Blast hits to 3555 proteins in 1390 species: Archae - 105; Bacteria - 2228; Metazoa - 282; Fungi - 444; Plants - 117; Viruses - 0; Other Eukaryotes - 379 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:-:6574472..6576231 | ||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 42426.10 Da | ||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 8.95 | ||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.28 | ||||||||||||||||||||||||||||||||||||||||||||
| Length | 377 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MATAKTWKIA REIGDAVIKA SRNPNRRWYG PHMAAAVRAI SERIPLVDFV LEIRDARIPL SSEYELLRKF SPLPSKRIIV LNKMELADPL ELKKCIDYFE 101: ERNYLSYAVN SHNKDCVKQL LNFLQSQVRE LHKAGHSGHT TTMMLLGIPN VGKSALSNSL HHIGRISAAE KGKLKHTTVS SQPGDTKDIM SLKIGSHPNV 201: YVLDTPGIFP PNLYDAEICA KLALTGAIPD DIVGELKLAR LFLTILNSSH EYKKWAKLCK SQDLTESLSD ESSKSDAKHK RQYATDHTQD FIVYDVRRVL 301: YETISAFDGN LEDEISMGNL IETQFAALRS VLRVPEEASE FADLRVASKI LNLYRTGRLG HYTLEHVSAL AKSYTYL |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)