AT4G10010.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 0.997 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Protein kinase superfamily protein | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G33770.1); Has 116672 Blast hits to 115652 proteins in 4421 species: Archae - 83; Bacteria - 13163; Metazoa - 44283; Fungi - 12132; Plants - 27758; Viruses - 447; Other Eukaryotes - 18806 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:-:6263878..6265720 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 52912.00 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 10.13 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.57 | ||||||||||||||||||||||||||||||||||||
| Length | 469 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MVAMKKVRFV NMDPESVRFM AREINILRKL DHPNVMKLEC LVTSKLSGSL YLVFEYMEHD LSGLALRPGV KFTESQIKCY MKQLLSGLEH CHSRGILHRD 101: IKGPNLLVNN DGVLKIGDFG LANIYHPEQD QPLTSRVVTL WYRAPELLLG ATEYGPGIDL WSVGCILTEL FLGKPIMPGR TEVEQMHKIF KFCGSPSDDY 201: WQKTKLPLAT SFKPQQPYKR VLLETFKNLP PSALALVDKL LSLEPAKRGT ASSTLSSKFF TMEPLPCNVS SLPKYPPSKE LDAKVRDEEA RRKKSETVKG 301: RGPESVRRGS RDFKSTATTP EFVASGQSKD TITTKRFNPQ EDSRTGLRGD RDQKGFSHTN SMIHPSITAT WSKNESCRNN VVELKATRSS NVPMTGRYLS 401: PSHKEDVAVQ TTTTYVRKKN RMHCSGPLMP PGGNIEDILK DHERQIQEAV RKSRLEKSAT RKNNKTCVK |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)