AT4G09930.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Avirulence induced gene (AIG1) family protein | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Avirulence induced gene (AIG1) family protein; FUNCTIONS IN: GTP binding; INVOLVED IN: response to bacterium; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: AIG1 (InterPro:IPR006703); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT4G09940.1); Has 4437 Blast hits to 3641 proteins in 404 species: Archae - 27; Bacteria - 424; Metazoa - 1814; Fungi - 220; Plants - 312; Viruses - 19; Other Eukaryotes - 1621 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:+:6228556..6230048 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 37803.30 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 5.65 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.53 | ||||||||||||||||||||||||||||||||
| Length | 335 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MGGGLVEVDV QTGQDACESD LPMKPSRTLV LIGCSGNGKS ATGNSILRSE AFKSKGQAAA VTKECELKST KRPNGQIINV IDTPGLFSLF PSNESTIREI 101: LKCSHLAKEG IDAVLMVFSL RSRLTEEEKS VPFVLKTLFG DSIFDYLIVV FTNEDSLIDD NVTINEYLEG SPDFKEILAA CNNRMVLFEN RLRTSKRKKA 201: KQVQKLLDLV EEVERKNNNK PFLFDLSHES MESEAVVDEK AKKIRAMKSN YTKQEMSNWK EEEVNSPLAK KVEKVIETTS LLEQKLNQEQ NARLEAEKRA 301: NKLHEESSEE IKILKEKLER AQKELEKRDQ GCIIL |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)