AT4G09360.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.990 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : NB-ARC domain-containing disease resistance protein | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
NB-ARC domain-containing disease resistance protein; FUNCTIONS IN: nucleoside-triphosphatase activity, nucleotide binding, ATP binding; INVOLVED IN: apoptosis, defense response; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) family (TAIR:AT5G48770.1); Has 14633 Blast hits to 11701 proteins in 482 species: Archae - 8; Bacteria - 658; Metazoa - 1518; Fungi - 72; Plants - 12056; Viruses - 4; Other Eukaryotes - 317 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:+:5940186..5943280 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 96668.60 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.08 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.18 | ||||||||||||||||||||||||||||||||||||||||
| Length | 853 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MDVDMERLNP LLSIESENEV RMIGIWGMGG IGKTTIAKCL YEEYSRRFVH YCFIENVRIF AKNGLPYLQE KLLSEIRGKK QETLWSVEKG CRLIKSKLKE 101: KNFLVLDDVD NVDQLHALAK ETSWFGPGSR IIITTRDFGL LYSFGVRLLY RVSFLDDNDA IKVFKHVAFD GGQPPFDVYH QFSVRASRLA QGLPSALEAF 201: GALGILETVP QKRIKDILKT SYDGLDEEEQ AAFLHVACLF NGDSVHRVNA LIDDGDMRIK ALEVKSLIDI SLDGCITLHV LIEQAAREID TAMVEGVALH 301: MCEMIHVLPI DGNILNTINN LKFFKAFTHI EVMNSKLQFL PGTANNSGGL GQLRRLDVTG SKNLREIPDL SRTMLLEELI MKGCTRLEKT LDIRKGCPSR 401: TWTKATPTNN IEASQRSKEA EFSCKPIYRR EDTHRLVASH GNRRAPLLYS EQKIPDELVM VPKKRFPIIS SFYDLKSLSI MRFSHIADGT PFRCISFSGF 501: QCLVELNLIN LNIQKIPDNI GLMQSLEKVD LSGNDFRNLP ASTKNLSKLK YARLSNCIKL EAFVELTELQ TLKLSGCTNL ESLLELPYAV QDVGRFCLLA 601: LELDNCKNLQ ALSEQLSHFS NLIHLDLSSH DFEKLKSVEE LPLNLKHLYA HGCDSLESVD LSPKHSIKHL DLSHCFGLQQ DEQQITQFLN DKCSQEVSQR 701: FLCLPGTEVP RNFDNQSHGT STKISLFTPT LLSFAACILI SCERSFYLQF PAFSYDWNRK DDEVISINLT PNLNLSSEIE EEETVTSHHL VIIHVPSSIN 801: TDKIEDLRLE SSLQFPEEFQ FSPCEIRACG IRMVDEETKC LESSPLMPLL EKK |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)