AT4G08850.2
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.979 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Leucine-rich repeat receptor-like protein kinase family protein | ||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Leucine-rich repeat receptor-like protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Tyrosine-protein kinase, active site (InterPro:IPR008266), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase family protein with leucine-rich repeat domain (TAIR:AT1G35710.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | ||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:-:5637467..5640496 | ||||||||||||||||
| Molecular Weight (calculated) | 112122.00 Da | ||||||||||||||||
| IEP (calculated) | 6.86 | ||||||||||||||||
| GRAVY (calculated) | -0.17 | ||||||||||||||||
| Length | 1009 amino acids | ||||||||||||||||
| Sequence (TAIR10) (BLAST) |
0001: MNKTNPERKI SLTSFKERMA CKEKPRDLQV LLIISIVLSC SFAVSATVEE ANALLKWKST FTNQTSSSKL SSWVNPNTSS FCTSWYGVAC SLGSIIRLNL 0101: TNTGIEGTFE DFPFSSLPNL TFVDLSMNRF SGTISPLWGR FSKLEYFDLS INQLVGEIPP ELGDLSNLDT LHLVENKLNG SIPSEIGRLT KVTEIAIYDN 0201: LLTGPIPSSF GNLTKLVNLY LFINSLSGSI PSEIGNLPNL RELCLDRNNL TGKIPSSFGN LKNVTLLNMF ENQLSGEIPP EIGNMTALDT LSLHTNKLTG 0301: PIPSTLGNIK TLAVLHLYLN QLNGSIPPEL GEMESMIDLE ISENKLTGPV PDSFGKLTAL EWLFLRDNQL SGPIPPGIAN STELTVLQLD TNNFTGFLPD 0401: TICRGGKLEN LTLDDNHFEG PVPKSLRDCK SLIRVRFKGN SFSGDISEAF GVYPTLNFID LSNNNFHGQL SANWEQSQKL VAFILSNNSI TGAIPPEIWN 0501: MTQLSQLDLS SNRITGELPE SISNINRISK LQLNGNRLSG KIPSGIRLLT NLEYLDLSSN RFSSEIPPTL NNLPRLYYMN LSRNDLDQTI PEGLTKLSQL 0601: QMLDLSYNQL DGEISSQFRS LQNLERLDLS HNNLSGQIPP SFKDMLALTH VDVSHNNLQG PIPDNAAFRN APPDAFEGNK DLCGSVNTTQ GLKPCSITSS 0701: KKSHKDRNLI IYILVPIIGA IIILSVCAGI FICFRKRTKQ IEEHTDSESG GETLSIFSFD GKVRYQEIIK ATGEFDPKYL IGTGGHGKVY KAKLPNAIMA 0801: VKKLNETTDS SISNPSTKQE FLNEIRALTE IRHRNVVKLF GFCSHRRNTF LVYEYMERGS LRKVLENDDE AKKLDWGKRI NVVKGVAHAL SYMHHDRSPA 0901: IVHRDISSGN ILLGEDYEAK ISDFGTAKLL KPDSSNWSAV AGTYGYVAPG TLFDPLDKLV VDLTRLWSGR VEIMVRFGLF GLNFNQIKTK MFCFGLKFFL 1001: TMGWIWFSF |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)