AT4G08640.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : ATP binding | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
ATP binding; FUNCTIONS IN: ATP binding; INVOLVED IN: cellular protein metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Chaperonin Cpn60/TCP-1 (InterPro:IPR002423); BEST Arabidopsis thaliana protein match is: TCP-1/cpn60 chaperonin family protein (TAIR:AT3G03960.1); Has 422 Blast hits to 422 proteins in 215 species: Archae - 0; Bacteria - 0; Metazoa - 162; Fungi - 127; Plants - 52; Viruses - 0; Other Eukaryotes - 81 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:+:5513313..5514174 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 19127.30 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 9.90 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.27 | ||||||||||||||||||||||||||||||||
| Length | 171 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MTMNIDDVHV AKILGVDSRK SCVVCGIVFK SDDVGNIRHP LKNAKVHNFG KSKEAMLETL VKDIAFSNVK VIVSRSSICE MTLRFCKIYK IMVLQISSDI 101: DINSLCSIVG AIDSSQHFQP HHLGYMDSTS LSEIAKRAVK KAERDAERAE RASQKKAEKF KSKLQAEKKK D |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)