AT4G08630.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plastid 0.783 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : | ||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G48860.2); Has 1487 Blast hits to 747 proteins in 184 species: Archae - 0; Bacteria - 56; Metazoa - 305; Fungi - 197; Plants - 180; Viruses - 3; Other Eukaryotes - 746 (source: NCBI BLink). | ||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:-:5506998..5511959 | ||||||||||||||||||||||||
| Molecular Weight (calculated) | 93711.70 Da | ||||||||||||||||||||||||
| IEP (calculated) | 6.14 | ||||||||||||||||||||||||
| GRAVY (calculated) | -0.73 | ||||||||||||||||||||||||
| Length | 845 amino acids | ||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MRNTRPIHVR NKSTEPGTPS SPMMTSPLMH RHTRSGSNAG PASNAKKAQT KAAAQRLAAV MSNQTGDEED SDEDLSFDYN AIGTGSIGLA AGRSHPSRSP 101: VIRNPMARRQ QMATPQLVDE DNEDDDFSVD VTSSRPSIGL PGGRAMRPQS PVMTKIAPPR RTQPTNEGNK NDGNDDDDVV SIDYTIGRPS IGLGSGRAMR 201: PQSSMNKTQP QGRPVMAAHQ RADEDNEDDE TPYVYTSSIP SVGLPGGRAA RSRSPLTKNP PLRHPHAVAQ PPSNGESDVD YDESYTSGMP SIGLAGGRSM 301: RPRTPLSIRT KEQPQTGLPT SGSRSSLYED STESSAMSTL THPSQTTNQV EQSPSARSAI SNKSSQSLSA MDQPPSARSS FNGRPIRTAP LMPSSVPISL 401: KPVTPAFQSN TPTNLRKDKR FSMDLGSSGN LRELGSQRST SALQDEVDML QEENESLLEK LRLAEDKCEE ADARAKQLEK QVEILGEGVT MDARLLSRQA 501: SVLFNFWKRG SSTTERGCFE NCITKSWRKE GRSSSLDQLH EVELELNSLK TVTKRLILTQ EEMEEVVLKR CWLSRYWGLC VRHGIQPDIA GGKHEYWSSF 601: APLPLEIVLS AGQRARDGVS QCNIFHLAAE ISLELFGIVL TSLVLTLWSP HQAANNTYGE REKSLQNLQE TSGEGNLENM IWVEKGLREL ASLKNQSSVI 701: QETDLKYDSL RCLKVQEAVA FVMAQNRRNT SSKFFVSDEV KMPMDGQFEA FELSDEEVED VNFKQAWLSY FWRRAKNHEI ESDLVDERLQ YWINQGTRSA 801: TSQDAVDVER GLMELRKLNI ESQLWQKSRK GLDHESNPSH LELSF |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)