AT4G08430.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 0.997 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Ulp1 protease family protein | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Ulp1 protease family protein; FUNCTIONS IN: cysteine-type peptidase activity; INVOLVED IN: proteolysis; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF1985 (InterPro:IPR015410), Peptidase C48, SUMO/Sentrin/Ubl1 (InterPro:IPR003653); BEST Arabidopsis thaliana protein match is: Ulp1 protease family protein (TAIR:AT5G45570.1); Has 1575 Blast hits to 1350 proteins in 240 species: Archae - 13; Bacteria - 177; Metazoa - 404; Fungi - 120; Plants - 315; Viruses - 3; Other Eukaryotes - 543 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:-:5347396..5350436 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 92523.30 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 7.90 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.57 | ||||||||||||||||||||||||||||||||
| Length | 808 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MHEMWCLIDR RPIRFSLYEF ENITGLNCDM FDESDTGETD YKDFWNEMGV AMSVGPLFTE LERVFEISKT WSLEKRMMVG RLCLQYVGVH GIHHGSRVPL 101: SSAKRVLDPV AFEKYPWGRV AFDSLLRSVK FVKYDGDSYV IHGCVQALLV WIYESVPGIG EACGFRKTTL TGVPLLDWRS SKKRFNFTAF IEKEKAAHGQ 201: VSRHKRKQNQ ESSNEDGESK VMESTPADDV SHKKQRTGKA HIKVDEEEKT SLLDIRNMLE KMNVTISDMD KNASSRLDGL EKKVTCLEAS VKTRFEAVET 301: DMRVLKESQP LVVCNEAATS NNNDEYEANS NQCSWVVEEK SGSVDGLPIQ RVVKKAVNSV KNMEAATKVL TKKKVAKSDK KKTIVNVEKV EKPKPEMKKT 401: AVKVEKVDSP KPEKKKSVVA PTTKTFDDDV VDVTDKVNAD NLKMASRSEE TFSNPLDQMA NKATTDALRA LQEGLDNLDG ITSKRRRVPQ LAGSQKYPSV 501: GNSTVKRIIT DVPSSSSVTE HLQPVSDDQF DRLKDWLEPD FEKEGLNTSN FNARFYWQIM TPRSDWSTEK YGWLKDYHMG AAMSLFRRRF NRDPSKYPNQ 601: RIAFLDQDLI STMLKDYKQF QPDYRCFKFR EHYEDQVNGT AQCDAAKNKK WFVDVDHLYA YLFVNGNHWV ALDIDLPKKR INVYDSIPSL TTDTEMVIQC 701: MFVMTMIPAM LSSFIPSKQR RRSYSKLEWK RITKIPENLD ACDCAIYSIK YIECLALGKS FDGLCDENMQ SLWTKLAVEM FEELGKNAGT LHSEVRCKAF 801: KFPSLMDD |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)