AT4G05497.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.630 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : RNI-like superfamily protein | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
RNI-like superfamily protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810); BEST Arabidopsis thaliana protein match is: RNI-like superfamily protein (TAIR:AT4G05460.1); Has 1787 Blast hits to 1493 proteins in 145 species: Archae - 0; Bacteria - 0; Metazoa - 786; Fungi - 197; Plants - 734; Viruses - 0; Other Eukaryotes - 70 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:-:2777903..2778801 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 27439.60 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 7.83 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.00 | ||||||||||||||||||||||||||||||||||||
| Length | 246 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MSSSSSSPFP QAMKNGEYRN WAELPPELTS SILLRLGAIE ILQNAQRVCK SWRRVCQDPS MWRKIDIRIK ENLVNSVELF YVIEPLCCRA VDLSQGGLLE 101: INIDYLVNTS FLNYIADRSS NLRRLGVVDC APVLSRGVVE AAMKLPLLEE LDITYKSSIR EQELKVVGQS CPNLRTLKLN CTGDVKCCDK VALAIAETMP 201: GLRHLQLFRN GLSETGLNAI LEGCPHLKNL GLHQCLNINI VGDIVK |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)