AT4G05140.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.859 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Nucleoside transporter family protein | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Nucleoside transporter family protein; FUNCTIONS IN: nucleoside transmembrane transporter activity; INVOLVED IN: transport; LOCATED IN: membrane; CONTAINS InterPro DOMAIN/s: Delayed-early response protein/equilibrative nucleoside transporter (InterPro:IPR002259); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT4G05120.1); Has 856 Blast hits to 813 proteins in 166 species: Archae - 0; Bacteria - 2; Metazoa - 379; Fungi - 84; Plants - 207; Viruses - 0; Other Eukaryotes - 184 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:-:2651015..2653208 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 46297.20 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 9.12 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.55 | ||||||||||||||||||||||||||||||||||||||||
| Length | 419 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MVARFENQAP ENLHGKYQAM VVCCILGIGS LVSWNSLLSV GDYYYQVFPD YHPSRVLTFV YQPFSIGTIV IFAYNESKIN TRKRNLIGYI VFTTSIFLLI 101: ILDLATKGHG GIGPYIVLCA IVGSFGFADA SVRGGMIGDL SLMCPELIQS FVAGLAVAGA LTSAFRLITK AAFEKTHDGL RKGAMIFLAI STLVEFLCVL 201: LYAYVFPKLP IVKYYRSKAA SEGSKTVYAD LAAAGIQNQS VLTADDVSKD KRLNNKELLL ENVDYVVNLF LIYVLTLSIL PGFLYENTGQ HGLGSWYALV 301: LIAMYNWWDL VGRYIPMVKW LNVENRKGLT VAVLTRFLLV PAFYFTAKYG DQGWMILLVS ILGLTNGHLT VCILAKAPRG YTGPEKNALG NLLVLFILWG 401: AFVGCALGWL WLIGKKNAF |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)