AT4G03820.1::SUBA5

AT4G03820.1

Subcellular Consensus
(Prediction and Experimental)

min:

:max

SUBAcon:
plasma membrane 0.989
What is SUBAcon?

Predictors

External Curations

no data

Experimental Localisations and PPI

FP	MS/MS	PPI
		PMID:24833385 (2014): AT1G14700.1:None: PMID:24833385 (2014): AT5G06320.1:None: PMID:24833385 (2014): AT3G17000.1:None: PMID:24833385 (2014): AT1G17280.1:None: PMID:24833385 (2014): AT5G25752.1:None: PMID:24833385 (2014): AT1G47640.1:None: PMID:24833385 (2014): AT3G25805.1:None: PMID:24833385 (2014): AT1G29060.1:None: PMID:24833385 (2014): AT5G59650.1:None: PMID:24833385 (2014): AT1G21240.1:None: PMID:24833385 (2014): AT5G05690.1:None: PMID:24833385 (2014): AT2G27290.1:None: PMID:24833385 (2014): AT3G66654.1:None: PMID:24833385 (2014): AT1G34640.1:None: PMID:24833385 (2014): AT1G14020.1:None: PMID:24833385 (2014): AT4G01410.1:None: PMID:24833385 (2014): AT2G26180.1:None: PMID:24833385 (2014): AT3G10640.1:None: PMID:24833385 (2014): AT3G12180.1:None:

SUBAcon links
AGI-AGI relationships

Coexpression

PPI

AT3G47670.1 plasma membrane [3.88]
AT1G63010.1 vacuole [3.72]
AT2G17120.1 plasma membrane [3.48]
AT4G26970.1 mitochondrion [3.46]
AT5G65990.1 vacuole [3.44]
AT1G53830.1 extracellular [3.44]
AT3G01650.1 nucleus [3.44]
AT1G69640.1 endoplasmic reticulum [3.42]
AT4G05160.1 peroxisome [3.38]
AT5G13890.1 plasma membrane [3.36]

AT1G47640.1 endoplasmic reticulum
AT3G17000.1 endoplasmic reticulum
AT3G12180.1 endoplasmic reticulum
AT1G14700.1 extracellular
AT1G34640.1 extracellular
AT1G17280.1 golgi
AT3G66654.1 golgi
AT1G29060.1 golgi
AT1G14020.1 golgi
AT3G10640.1 nucleus
AT2G26180.1 nucleus
AT1G21240.1 plasma membrane
AT4G01410.1 plasma membrane
AT5G05690.1 plasma membrane
AT5G06320.1 plasma membrane
AT5G59650.1 plasma membrane
AT2G27290.1 plastid
AT3G25805.1 plastid
AT5G25752.1 plastid

Description (TAIR10)

protein_coding : Protein of unknown function (DUF3537)

Curator
Summary (TAIR10)

Computational
Description (TAIR10)

Protein of unknown function (DUF3537); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3537 (InterPro:IPR021924); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3537) (TAIR:AT4G22270.1); Has 140 Blast hits to 140 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 138; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).

Protein Annotations

eggNOG:ENOG410JSQ9	eggNOG:ENOG41108KP	EMBL:BT033040	EMBL:CP002687
EnsemblPlants:AT4G03820	EnsemblPlants:AT4G03820.1	entrez:825687	ExpressionAtlas:B3LF52
GeneID:825687	GO:GO:0016021	Gramene:AT4G03820.1	hmmpanther:PTHR31963
hmmpanther:PTHR31963:SF7	HOGENOM:HOG000239174	InterPro:IPR021924	KEGG:ath:AT4G03820
ncoils:Coil	Pfam:PF12056	PhylomeDB:B3LF52	Proteomes:UP000006548
RefSeq:NP_192291.2	TAIR:AT4G03820	TMHMM:TMhelix	UniGene:At.34108
UniProt:B3LF52

Coordinates (TAIR10)

chr4:-:1772114..1774380

Molecular Weight (calculated)

50253.40 Da

IEP (calculated)

8.93

GRAVY (calculated)

0.16

Length

437 amino acids

Sequence (TAIR10)
(BLAST)

001: MEESSNQQIL NSETRPDPIQ KPPESPATKL SFPRLFLWFD QSNRIKTLLS WSIFFLLAVI VPMISHFVLI CADCDFKHRR PYDGLVQLSL SIFAGISFVS
101: LSDWSKKYGI RRFLFFDKLK DVSDKVRIGY EAKIQRSMKL LAIFVLPSTT LQAIYRIWWY ASGFNQIPYI INPTLSHVLA CTLQLSSWLY RTSLFIIACI
201: LYQNICHLQV LRLDEFARCF ASEIKDFSSI LAEHLKIRRE LKIVSHRFRR FILLSLFFVT ATQFMALLTT IRASVPFNIY EVGELALCST SLVSGLFICL
301: KSATQMTHKA QSVTSIATKW NVCASLDTFD VLYDGETPKC PTTTQHSQIL SRRRNVVQSS DDDEEGEGDD NDLEIHPIFA RAISSQKRQA LVTYLENNRA
401: GITVYGFLVD KTWLRMIFSI ELALLLWLLK KTIMNIT