AT4G03590.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 0.999 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Cystatin/monellin superfamily protein | ||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Cystatin/monellin superfamily protein; CONTAINS InterPro DOMAIN/s: Cystatin-related, plant (InterPro:IPR006525); BEST Arabidopsis thaliana protein match is: Cystatin/monellin superfamily protein (TAIR:AT4G03570.1); Has 124 Blast hits to 116 proteins in 22 species: Archae - 0; Bacteria - 1; Metazoa - 12; Fungi - 17; Plants - 79; Viruses - 1; Other Eukaryotes - 14 (source: NCBI BLink). | ||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:-:1600780..1602950 | ||||||||||||||||||||||||
| Molecular Weight (calculated) | 28515.60 Da | ||||||||||||||||||||||||
| IEP (calculated) | 4.77 | ||||||||||||||||||||||||
| GRAVY (calculated) | -0.86 | ||||||||||||||||||||||||
| Length | 246 amino acids | ||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MVLNQCANVT MIEEKLSKLM EEIESVEADE SEDTSDDEET KTNVHEANFD MLMAPEWDVH SFEEKTMIKD SMEASSSVVV SSCLKKRKAE FDPEDEEESN 101: GEKEEGSDGK AKIEEPKAKT DYYFKVPEWD VDSFDALKPT DHYKGFRPMN LEWEAIRGIK NFREYREEMV YVVSKNLTKT RFDLNVELVE VVRGYYRGGP 201: KSKSYITFMV RKKPDGPLGE YQAKCMVTLH RKRHPILCRP TPTPKP |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)