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AT4G03590.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 0.999
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data no PPI data
Description (TAIR10) protein_coding : Cystatin/monellin superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Cystatin/monellin superfamily protein; CONTAINS InterPro DOMAIN/s: Cystatin-related, plant (InterPro:IPR006525); BEST Arabidopsis thaliana protein match is: Cystatin/monellin superfamily protein (TAIR:AT4G03570.1); Has 124 Blast hits to 116 proteins in 22 species: Archae - 0; Bacteria - 1; Metazoa - 12; Fungi - 17; Plants - 79; Viruses - 1; Other Eukaryotes - 14 (source: NCBI BLink).
Protein Annotations
EMBL:AC005142EMBL:AL161497EMBL:CP002687EnsemblPlants:AT4G03590
EnsemblPlants:AT4G03590.1entrez:825659GeneID:825659Gramene:AT4G03590.1
hmmpanther:PTHR31228hmmpanther:PTHR31228:SF15HOGENOM:HOG000131686InterPro:IPR006525
KEGG:ath:AT4G03590ncoils:CoilOMA:RHPILCRPhylomeDB:Q9SY37
PIR:E85045Proteomes:UP000006548RefSeq:NP_192268.1TAIR:AT4G03590
TIGRfam:TIGR01638TIGRFAMs:TIGR01638UniGene:At.54120UniProt:Q9SY37
Coordinates (TAIR10) chr4:-:1600780..1602950
Molecular Weight (calculated) 28515.60 Da
IEP (calculated) 4.77
GRAVY (calculated) -0.86
Length 246 amino acids
Sequence (TAIR10)
(BLAST)
001: MVLNQCANVT MIEEKLSKLM EEIESVEADE SEDTSDDEET KTNVHEANFD MLMAPEWDVH SFEEKTMIKD SMEASSSVVV SSCLKKRKAE FDPEDEEESN
101: GEKEEGSDGK AKIEEPKAKT DYYFKVPEWD VDSFDALKPT DHYKGFRPMN LEWEAIRGIK NFREYREEMV YVVSKNLTKT RFDLNVELVE VVRGYYRGGP
201: KSKSYITFMV RKKPDGPLGE YQAKCMVTLH RKRHPILCRP TPTPKP
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)