AT4G03470.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 0.995 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Ankyrin repeat family protein | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Ankyrin repeat family protein; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: ankyrin repeat family protein (TAIR:AT4G05040.4); Has 17879 Blast hits to 9120 proteins in 422 species: Archae - 19; Bacteria - 1109; Metazoa - 10141; Fungi - 1293; Plants - 2042; Viruses - 49; Other Eukaryotes - 3226 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:-:1542059..1544283 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 76278.60 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 7.45 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.00 | ||||||||||||||||||||||||||||||||||||||||
| Length | 683 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MDVSEARLSR IESQSSIDSS HDQRRQGYFS MNKINNGLRS LSSRGFLRNR GKAIPLPMKD TEKTVPEFLV NLKFSDLFDL PGEYVLMNAE MLSTLGNEEW 101: LEKLRSHGTP LTCLKNDRGD SVLHLAATWS HLELVKNIVS ECSCLLMESN SKDQLPLHVA ARMGHLAVVE DLVASVTFFS ARLAEEDREI LNPYLLKDIN 201: GDTALNLALK GHYTEVALCL VNANRQASFL ACKDGISPLY LAVEAKDASL VKAMLGNDGP QRKNLNLEGR KYLAHAALNS LSTDILDVIL NEYPSLVDER 301: DEEGRTCLSF GASIGYHKGV CNLLNRSRKG VFVCDDDGSY PIHLAVEKGR IKVVKEICKR CPYSKLLLNK KGQNLLHIAA ESGKFRILRH LTAHEQINHL 401: ANEKDVDGNT PLHLATIYWR PRAVRELGGK KNLLIQNNNG LVALDIAESK LQPHYIFRER LTLLALVQLH FQNDPRCAHT MIQTRPIMPQ GGNKDYINAL 501: LVVAALITTV TFTSGFTIPG GFKDSTPNVG MANLITNPRL ILFLIFDILA LETSFLAVVS LILAQLGDPT LYQSSVRVAM ISLYFAMYFM TLAFFFVMVI 601: AAGNVRWLVY VIFCLIFSIL TLAFSRFMPH LLLHYCGSSY KLMMPFVSFA NSCDDDGHES PQFSAHKSEK ISNNDQVEMS DTT |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)