AT4G01550.2
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : NAC domain containing protein 69 | ||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
NAC domain containing protein 69 (NAC069); BEST Arabidopsis thaliana protein match is: NAC with transmembrane motif1 (TAIR:AT4G01540.1); Has 58 Blast hits to 56 proteins in 4 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 56; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | ||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:-:674025..675758 | ||||||||
| Molecular Weight (calculated) | 36830.60 Da | ||||||||
| IEP (calculated) | 4.41 | ||||||||
| GRAVY (calculated) | -0.71 | ||||||||
| Length | 328 amino acids | ||||||||
| Sequence (TAIR10) (BLAST) |
001: MHEYHITCLP QDQRNYVICQ VMYKGEDGDV PSGGNNSSEP SQSLVSDSNT VRATSPTALE FEKPGQENFF GMSVDDLGTP KNEQEDFSLW DVLDPDMLFS 101: DNNNPTVHPQ APHLTPNDDE FLGGLRHVNR EQVEYLFANE DFISRPTLSM TENRNDHRPK KALSGIIVDY SSDSNSDAES ISATSYQGTS SPGDDSVGSS 201: NRQFLQTGGD EILSSCNDLQ TYGEPSISSS TRQSQLTRSI IRPKQEVKQD TSRAVDSDTS IDKESSMVKT EKKSWFITEE AMERNRNNPR YIYLMRMIIG 301: FILLLALISN IISVLQNLNP AMKFDRER |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)