AT4G01430.2
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:extracellular 0.652 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : nodulin MtN21 /EamA-like transporter family protein | ||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
nodulin MtN21 /EamA-like transporter family protein; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620); BEST Arabidopsis thaliana protein match is: nodulin MtN21 /EamA-like transporter family protein (TAIR:AT1G11460.1); Has 1184 Blast hits to 1113 proteins in 28 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 1180; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | ||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:+:585707..587691 | ||||||||
| Molecular Weight (calculated) | 28048.90 Da | ||||||||
| IEP (calculated) | 9.45 | ||||||||
| GRAVY (calculated) | 0.47 | ||||||||
| Length | 252 amino acids | ||||||||
| Sequence (TAIR10) (BLAST) |
001: MMKEEQWAPV IVMLISSVAM GSVNALVKKA LDVGVNHMIF GAYRMAISAL ILVPFSYIWE RIENAQNLKS KAGVLKVMGT LICIMGAMLL TFYKGPELSN 101: PHSHPQARHN NNNNNGHDQT KKWLLGCLYL VIGTVLLSLW MLFQGKLSFK YPGNKYSSTC LMSVFASFQC AILSLYKSRD VKDWIIEDKF VILVTLYAGI 201: VGQAMSTVVT SWSIKMTGAV FVSTFSPVSL VAATLFDFLI LHSPLYLAYL DQ |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)