AT4G00500.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.965 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : alpha/beta-Hydrolases superfamily protein | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: triglyceride lipase activity, calmodulin binding; INVOLVED IN: lipid catabolic process, lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921), Mono-/di-acylglycerol lipase, N-terminal (InterPro:IPR005592); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G49050.1); Has 561 Blast hits to 561 proteins in 134 species: Archae - 0; Bacteria - 2; Metazoa - 171; Fungi - 76; Plants - 213; Viruses - 0; Other Eukaryotes - 99 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:-:225214..226978 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 52171.00 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 5.73 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.12 | ||||||||||||||||||||||||||||||||||||
| Length | 460 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MSILCCVPVL ECVYCLGCTH WLWKKCLYSA GHESENWGLA TSDEFEPIPR ICRLILAVYE ENLHDPMWAP PDGYGIDPNH VILKKDYDQT EGRVTPYMIY 101: LDHENGDVVL AIRGLNLAKE CDYAVLLDNK LGQTKFDGGY VHNGLLKAAM WVFEEEHVVL RELLEANPSY SLTFVGHSLG AGVVSLLVLF VIQNRVRLGN 201: IERKRIRCFA IAPPRCMSLH LAVTYADVIN SVVLQDDFLP RTTTALENVF KSIICLPCLL CLTCLKDTFT FEERKLKDAR RLYAPGRLYH IVVRKPLRLG 301: RYPPVVRTAV PVDGRFEQIV LSCNATADHA IIWIERESQR ALDLMVEEDQ VMQIPVEQKI VRQKSIVEDH DEEYRAAIMK AASLNIPMSP SPSYGTFHDT 401: EEGESSAGSG MEGSPSGWSF KGMRRKWDQF IDCHFPVNDN SEHMIFKNQE SQALLCGQET |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)