AT3G63320.1
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:plastid 1.000 What is SUBAcon? |
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Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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Description (TAIR10) | protein_coding : Protein phosphatase 2C family protein | ||||||||||||||||||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
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Computational Description (TAIR10) |
Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT3G63340.1); Has 5123 Blast hits to 5121 proteins in 286 species: Archae - 0; Bacteria - 6; Metazoa - 1363; Fungi - 520; Plants - 2196; Viruses - 5; Other Eukaryotes - 1033 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||
Protein Annotations |
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Coordinates (TAIR10) | chr3:-:23389838..23391556 | ||||||||||||||||||||||||||||||||||||||||||||
Molecular Weight (calculated) | 46805.00 Da | ||||||||||||||||||||||||||||||||||||||||||||
IEP (calculated) | 6.19 | ||||||||||||||||||||||||||||||||||||||||||||
GRAVY (calculated) | -0.15 | ||||||||||||||||||||||||||||||||||||||||||||
Length | 423 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: MVELRQFSDL PIALSGISRI ADPSPPPPVV AIRRRFKGGG NTRRIVFSVP LIFAFPFPTG TPKDVLVGIA AVFDGHSGSE ASEMASQLLL DYFALHIYFL 101: LDATFSKELT GKLPNSLMHL YDLDSQRFQD SLPLNFHLDI LKEALLRAIY DIDATFTKEA STRKLDSGST ATIALIADGQ LLVASIGDSK ALLCSERYET 201: PEEAKATLIK LYRERKRNQD SSPSRFSDLK LEHRTGLMRF IAKELTKDHH PDREDEMLRV KAAGGYVTKW AGVPRVNGQL AVSRSIGDLT YRSYGVISAP 301: EVMDWQPLVA NDSYLVVSSD GIFEKLEVQD ACDRLWEVKN QTSFGAGVPS YCSISLADCL VNTAFEKGSM DNMAAVVVPL KSNLDWESQP KEQSVGPSGF 401: KMKNTYALPC EFLSSQPNLF RMG |
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See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)