AT3G63095.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.676 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Tetratricopeptide repeat (TPR)-like superfamily protein | ||||||||||||||||||||||||
| Curator Summary (TAIR10) |
Encodes a Protease inhibitor/seed storage/LTP family protein | ||||||||||||||||||||||||
| Computational Description (TAIR10) |
Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612); Has 80052 Blast hits to 23701 proteins in 1517 species: Archae - 357; Bacteria - 20846; Metazoa - 15827; Fungi - 6834; Plants - 3473; Viruses - 635; Other Eukaryotes - 32080 (source: NCBI BLink). | ||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:+:23315506..23316258 | ||||||||||||||||||||||||
| Molecular Weight (calculated) | 29509.80 Da | ||||||||||||||||||||||||
| IEP (calculated) | 5.79 | ||||||||||||||||||||||||
| GRAVY (calculated) | -1.53 | ||||||||||||||||||||||||
| Length | 250 amino acids | ||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MDTLFIAVTL ALALSSFTRG QRVIQIPPPR PLCASQYALA NYACSRLPMH TVPPPAPITP PPAPIAPPPP EHDHHDHDHD HDHDHDHDDD HDDDDDHDHD 101: DDHDHDHDDD HDHDDDDRDR DRDRDRDRDR DRDHDRAHDD HDHNHDHDND HNDNNHDHNH DADHHNNDDN SHDQHRRRHH RHHHRHHHRH REETFAQQEC 201: CKWLKQMDNE CVCDLLVRLP PLLAKPIHNY TVFVDESCIV TFVCGGRLIS |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)