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AT3G62180.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
extracellular 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Plant invertase/pectin methylesterase inhibitor superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Plant invertase/pectin methylesterase inhibitor superfamily protein; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pectinesterase inhibitor (InterPro:IPR006501); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily protein (TAIR:AT2G47050.1); Has 73 Blast hits to 72 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 73; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410JXFDeggNOG:ENOG411040WEMBL:AL138651EMBL:BT030060
EMBL:CP002686EnsemblPlants:AT3G62180EnsemblPlants:AT3G62180.1entrez:825391
Gene3D:1.20.140.40GeneID:825391GO:GO:0004857Gramene:AT3G62180.1
hmmpanther:PTHR31707hmmpanther:PTHR31707:SF33HOGENOM:HOG000153221InterPro:IPR006501
KEGG:00040+3.1.1.11KEGG:00500+3.1.1.11KEGG:ath:AT3G62180OMA:TSLCCKT
Pfam:PF04043PhylomeDB:Q9M1Q6PIR:T48010Proteomes:UP000006548
RefSeq:NP_191777.1SMART:SM00856SUPFAM:SSF101148TAIR:AT3G62180
TIGRfam:TIGR01614TIGRFAMs:TIGR01614UniGene:At.50895unipathway:UPA00545
UniProt:Q9M1Q6
Coordinates (TAIR10) chr3:-:23019832..23020479
Molecular Weight (calculated) 23730.70 Da
IEP (calculated) 7.82
GRAVY (calculated) 0.01
Length 215 amino acids
Sequence (TAIR10)
(BLAST)
001: MNTPIKLFFL FIFVAATATA KPVKRTNYLF TPHAKAVAGI CTVIPTDTSL CCKTLKHVPT NDPIELIRAL VAAAETSVKQ SVTFLSGIKP KHMSDATATA
101: VVNSCEKNLN YALEDFADFW KATGKDVTTL AHNYFTCKKE LMSIMGYHST CLDDIEDKIL LKEVGIGIGV GKNLTSDSFD VFNNLNTIFK TFGIKVKLNE
201: EDTSPRPPPL SDYYY
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)