AT3G61440.2
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:mitochondrion 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : cysteine synthase C1 | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
Encodes a cysteine synthase isomer CysC1. The isomer is however less effective in cysteine biosynthesis. It is involved in beta-cyanoalanine biosynthesis, an intermediate of cyanide detoxification pathway. | ||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
CYSTEINE SYNTHASE C1 (ATCYSC1); FUNCTIONS IN: cysteine synthase activity, copper ion binding, L-3-cyanoalanine synthase activity; INVOLVED IN: cysteine biosynthetic process, detoxification of nitrogen compound, cyanide metabolic process; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent enzyme, beta subunit (InterPro:IPR001926), Cysteine synthase A (InterPro:IPR005859); BEST Arabidopsis thaliana protein match is: O-acetylserine (thiol) lyase isoform C (TAIR:AT3G59760.1); Has 18552 Blast hits to 18542 proteins in 2624 species: Archae - 313; Bacteria - 12869; Metazoa - 388; Fungi - 549; Plants - 552; Viruses - 2; Other Eukaryotes - 3879 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:+:22736383..22737792 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 29227.60 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 5.44 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.05 | ||||||||||||||||||||||||||||||||
| Length | 272 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MIADAEKKKL IIPGKTTLIE PTSGNMGISL AFMAAMKGYR IIMTMPSYTS LERRVTMRSF GAELVLTDPA KGMGGTVKKA YDLLDSTPDA FMCQQFANPA 101: NTQIHFDTTG PEIWEDTLGN VDIFVMGIGS GGTVSGVGRY LKSKNPNVKI YGVEPAESNI LNGGKPGPHA ITGNGVGFKP EILDMDVMES VLEVSSEDAI 201: KMARELALKE GLMVGISSGA NTVAAIRLAK MPENKGKLIV TIHASFGERY LSSVLFDELR KEAEEMKPVS VD |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)