AT3G61300.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.544 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : C2 calcium/lipid-binding plant phosphoribosyltransferase family protein | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
C2 calcium/lipid-binding plant phosphoribosyltransferase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: tryptophan biosynthetic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Phosphoribosyltransferase C-terminal (InterPro:IPR013583), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: C2 calcium/lipid-binding plant phosphoribosyltransferase family protein (TAIR:AT4G11610.1); Has 6422 Blast hits to 4830 proteins in 287 species: Archae - 0; Bacteria - 0; Metazoa - 3763; Fungi - 508; Plants - 1619; Viruses - 8; Other Eukaryotes - 524 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:+:22687662..22690580 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 110784.00 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 9.60 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.33 | ||||||||||||||||||||||||||||||||||||||||
| Length | 972 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MMSNLKLGVE VISARLKPRE DYGGVNAYVE LRFDDQKVIT MTKIDDSSPV WNEKFFFNIS DTEDLSNQFL DAYVYNKTSS ITKSCLGKIR ILGTAFLPYS 101: EAVGLPYPLE KEKWSMFSSA AANGGELALK VFLTDNPSPK VPNLISTKKI PSKSRHKFHN IPTNESNHSP RGNQQSFQPQ PPPPQSQTAL PPPMMESSLY 201: QAPRFGTPIP TTMGFNPNPP DYSIKETKPI LGGGKRARSS DHDLVEPMEF LFIKIVKARN LPSMDLTGSL DPYIEVKLGN YTGKTKHFEK NQNPVWNEVF 301: AFSKSNQQSN VLEVIVMDKD MVKDDFVGLI RFDLNQIPTR VAPDSPLAPE WYRVNNEKGG EIMLAVWFGT QADEAFSDAT YSDALNAVNK SSLRSKVYHS 401: PRLWYLRVNV IEAQDLVIVP DRTRLPNPYV KIRLNNQVVR TKPSHSLNPR WNEEFTLVAA EPFEDLIISI EDRVAPNREE TLGEVHIPIG TIDKRIDDNR 501: TVPNRWFSLK TENQRRVRFA TTRLHLNVCL EGGYHVLDES TYYSSDFRPS MKELLSHKQP SFGVLELGIL RIEGLNLSQE GKKETVDAYC VAKYGTKWVR 601: TRTVTNCLNP RFNEQYTWEV YEPATVITIG VFDNNQINSG NGNKGDGKIG KIRVRISTLE AGRIYSHSYP LLVLRPSGLK KMGELHLAIR FSCSSMFQML 701: MQYWKPLLPK MHYARPLKVV QQEILRQHAV NLVAARLSRA EPPLRKEVVE YISDSNSHLW SMRKSRANLF RLSSVFSGLL GTGEWFQDIC RWKKPVETTA 801: IHIIFLVLVC SPEMILPVMS LCLFMLGVWN YRLRPRQPPH MDTRLSFADN IHPEELNEEF DTFPFSSQDP GIVKMRYERL RSIASRAQTV VGDIAGQGER 901: VQALLSWRDP RATSIFMVLC LVSTVVLYVV PFKVFVLLAG LYIMRPPRFR GKTPPGPINF FRRLPAKTDC ML |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)