AT3G60970.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.976 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : multidrug resistance-associated protein 15 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
member of MRP subfamily | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
multidrug resistance-associated protein 15 (MRP15); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; INVOLVED IN: transport, transmembrane transport; LOCATED IN: endomembrane system, integral to membrane; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: multidrug resistance-associated protein 9 (TAIR:AT3G60160.1); Has 674327 Blast hits to 354415 proteins in 3954 species: Archae - 12129; Bacteria - 545946; Metazoa - 13182; Fungi - 8004; Plants - 6730; Viruses - 20; Other Eukaryotes - 88316 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:+:22557535..22561575 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 117258.00 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.65 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.12 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 1053 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
0001: MSVDVQRITD FIWYVNSIWM LPIQIFSAIY ILQKHLGLGA LAALVTTLMV MACNYPLTRL QRNYQSDIMN AKDDRMKATS EILKNMKILK LQAWDNQFLN 0101: KVKTLRKKEY DCLWKSLRLQ DFTTFILWGA PSLISVVTFV TCMLMGVKLT AGAVLSALAT FQMLQSPIFG LPDLLSALVQ SKVSADRIAS YLQQSETQKD 0201: AVEYCSNDHT EFSVEIENGA FSWEPESSRP TLDDIELKVK SGMKVAICGA VGSGKSSLPS SILGEIQKLK GTVRVSGKQA YVPQSPWILS GTIRDNILFG 0301: SIYESEKYER TVKACALIKD FELFSNGDLT EIGERGINMS GGQKQRIQIA RAVYQNADIY LLDDPFSAVD AHTGRELFED CLMGILKDKT VLYVTHQVEF 0401: LPAADLILVM QNGRVMQAGK FEELLKQNIG FEVLTQCDSE HNISTENKKK EAKLVQDEET EKGVIGKEVY LTYLTTVKGG LLVPFIILAQ SCFQMLQIAS 0501: NYWMAWTAPP TAESIPKLGM GRILLVYALL AAGSSLCVLA RTILVAIGGL STAETFFSRM LCSIFRAPMS YFDSTPTGRI LNRASTDQSV LDLEMAVKLG 0601: WCAFSIIQIV GTIFVMSQVA WQVCVIFIPV AVACVFYQRY YTPTERELSR MSGVERAPIL HHFAESLAGA TTIRAFDQRD RFISSNLVLI DSHSRPWFHV 0701: ASAMEWLSFR LNLLSHFVFA FSLVLLVTLP EGVINPSIAG LGVTYGLSLN VLQATVIWNI CNAENKMISV ERILQHSKIP SEAPLVIDDQ RPLDNWPNVG 0801: SIVFRDLQVR YAEHFPAVLK NITCAFPGGK KIGVVGRTGS GKSTLIQALF RIVEPSHGTI VIDNVDITKI GLHDLRSRLG IIPQDNALFD GTIRLNLDPL 0901: AQYTDREIWE ALDKCQLGDV IRAKDEKLDA TVVENGENWS VGQRQLVCLG RVLLKKSNIL VLDEATASVD SATDGVIQKI INQEFKDRTV VTIAHRIHTV 1001: IESDLVLVLS DGRIAEFDSP AKLLQREDSF FSKLIKEYSL RSNHFAGSND LLS |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)