AT3G60510.3
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:mitochondrion 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : ATP-dependent caseinolytic (Clp) protease/crotonase family protein | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
ATP-dependent caseinolytic (Clp) protease/crotonase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Crotonase, core (InterPro:IPR001753); BEST Arabidopsis thaliana protein match is: ATP-dependent caseinolytic (Clp) protease/crotonase family protein (TAIR:AT4G31810.1). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:-:22357141..22360003 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 47433.30 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.83 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.16 | ||||||||||||||||||||||||||||||||
| Length | 426 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MHNAKGLLGR IVRDKLWRFG YRRSLCSLKL TSEDLDYQVL VEGSGCSRTA ILNRPPALNA LTTHMGYRLQ KLYKNWEEDP NIGFVMMKGS GRAFCAGGDI 101: VSLYHLRTRG SPDAIREFFS SLYSFIYLLG TYLKPHVAIL NGVTMGGGTG VSIPGTFRVA TDRTIFATPE TIIGFHPDAG ASFNLSHLPG RLGEYLGLTG 201: LKLSGAEMLA CGLATHYIRS EEVPVMEEQL KKLLTDDPSV VESCLEKCAE VAHPEKTGVI RRIDLLEKCF SHDTVEEIID SLVSFFTNDS ASMTISVTRS 301: NSVLGHQEIE ASRRKDTWCI TTLRRLKESS PLSLKVALRS IREGRLQTLD QCLIREYRMS LQGLIGPMSG NFCEGVRARL IDKDEAPKWD PPSLEKVSED 401: MVDDYFCALT PTEPDLDLPV KLRESI |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)