AT3G60060.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.551 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : NAD(P)-binding Rossmann-fold superfamily protein | ||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Male sterility, NAD-binding (InterPro:IPR013120); BEST Arabidopsis thaliana protein match is: fatty acid reductase 6 (TAIR:AT3G56700.1); Has 167 Blast hits to 159 proteins in 23 species: Archae - 0; Bacteria - 3; Metazoa - 20; Fungi - 4; Plants - 140; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | ||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:+:22182291..22183078 | ||||||||||||||||||||||||
| Molecular Weight (calculated) | 17498.10 Da | ||||||||||||||||||||||||
| IEP (calculated) | 7.25 | ||||||||||||||||||||||||
| GRAVY (calculated) | -0.04 | ||||||||||||||||||||||||
| Length | 154 amino acids | ||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MATVDLGSVR LFSFCFLARE RLFVTGKIVL VIKANDQEAA KKRLYFQFHP SILSKLLPVV EDIAEDNLGV DSETSLKISE EIDIIISSAA TTTFDDSLWN 101: FTGPWRIYSD ACQRGNNLRE RESDITLSIK GKKKLKYFVA MAKLYEPYAF FQAP |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)