AT3G59310.1
|
Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.942 What is SUBAcon? |
|
||||||||||||||||||||||||||||
| Experimental Localisations and PPI |
|
||||||||||||||||||||||||||||
|
SUBAcon links
AGI-AGI relationships |
|
||||||||||||||||||||||||||||
| Description (TAIR10) | protein_coding : Eukaryotic protein of unknown function (DUF914) | ||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
|||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
Eukaryotic protein of unknown function (DUF914); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF914, eukaryotic (InterPro:IPR009262); BEST Arabidopsis thaliana protein match is: Eukaryotic protein of unknown function (DUF914) (TAIR:AT3G59340.1); Has 755 Blast hits to 748 proteins in 196 species: Archae - 2; Bacteria - 101; Metazoa - 176; Fungi - 129; Plants - 126; Viruses - 0; Other Eukaryotes - 221 (source: NCBI BLink). | ||||||||||||||||||||||||||||
| Protein Annotations |
|
||||||||||||||||||||||||||||
| Coordinates (TAIR10) | chr3:-:21922316..21924313 | ||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 37365.90 Da | ||||||||||||||||||||||||||||
| IEP (calculated) | 6.14 | ||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.43 | ||||||||||||||||||||||||||||
| Length | 332 amino acids | ||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MGFDLKEIRT KKTLIGLGLG QLLSLLATSN GFTSSELARK GINVPTSQCF LNYVLLAIVY GSIMLYRRSD IKAKWYYYFL LAFVDVEANF LVVKAYQYTS 101: LTSVMLLDCW AIPCVLVLTW FYLKTKYRLM KISGVFICIV GVFMVVFSDV HAGDRAGGSN PVKGDFLVLA GATLYAVSNT SEEFLVKNAD TVELMTFLGF 201: FGAIISAIQV SILERDELKA IHWSTGAVFP FLRFTLTMFL FYPLVPVLLK TNGATMFNLS LLTSDMWAVL IRTFGYHEKV DWLYFLAFAT TATGLIIYSM 301: KEKDQEEHRF EEVGDEAAMQ RKLLGEDDEP GT |
||||||||||||||||||||||||||||
| See Also |
|
||||||||||||||||||||||||||||
Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)