AT3G58710.1
|
Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 ASURE: nucleus What is SUBAcon? |
|||||||||||||||||||||
| Experimental Localisations and PPI |
|
||||||||||||||||||||
|
SUBAcon links
AGI-AGI relationships |
|
||||||||||||||||||||
| Description (TAIR10) | protein_coding : WRKY DNA-binding protein 69 | ||||||||||||||||||||
| Curator Summary (TAIR10) |
member of WRKY Transcription Factor; Group II-e | ||||||||||||||||||||
| Computational Description (TAIR10) |
WRKY DNA-binding protein 69 (WRKY69); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 65 (TAIR:AT1G29280.1); Has 3301 Blast hits to 2851 proteins in 185 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3287; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). | ||||||||||||||||||||
| Protein Annotations |
|
||||||||||||||||||||
| Coordinates (TAIR10) | chr3:+:21715192..21716766 | ||||||||||||||||||||
| Molecular Weight (calculated) | 30248.60 Da | ||||||||||||||||||||
| IEP (calculated) | 4.87 | ||||||||||||||||||||
| GRAVY (calculated) | -0.84 | ||||||||||||||||||||
| Length | 272 amino acids | ||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MHRRAAIQES DDEEDETYND VVPESPSSCE DSKISKPTPK KSRRNVEKRV VSVPIADVEG SKSRGEVYPP SDSWAWRKYG QKPIKGSPYP RGYYRCSSSK 101: GCPARKQVER SRVDPSKLMI TYACDHNHPF PSSSANTKSH HRSSVVLKTA KKEEEYEEEE EELTVTAAEE PPAGLDLSHV DSPLLLGGCY SEIGEFGWFY 201: DASISSSSGS SNFLDVTLER GFSVGQEEDE SLFGDLGDLP DCASVFRRGT VATEEQHRRC DFGAIPFCDS SR |
||||||||||||||||||||
| See Also |
|
||||||||||||||||||||
Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)