AT3G58150.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:mitochondrion 0.999 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Optic atrophy 3 protein (OPA3) | ||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Optic atrophy 3 protein (OPA3); CONTAINS InterPro DOMAIN/s: Optic atrophy 3-like (InterPro:IPR010754); BEST Arabidopsis thaliana protein match is: Optic atrophy 3 protein (OPA3) (TAIR:AT1G28510.1); Has 387 Blast hits to 383 proteins in 168 species: Archae - 0; Bacteria - 0; Metazoa - 134; Fungi - 117; Plants - 78; Viruses - 0; Other Eukaryotes - 58 (source: NCBI BLink). | ||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:-:21532947..21534072 | ||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 22258.20 Da | ||||||||||||||||||||||||||||
| IEP (calculated) | 10.11 | ||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.58 | ||||||||||||||||||||||||||||
| Length | 194 amino acids | ||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MSQPKSLVQQ TMVLPLLKLG TLALRTICKP IANQLKKEAG VNPKFRQFII NIAQANHRFT TKLQRRASGR ITDAVIRPLN EERAVQAAAD LLGELFAFTV 101: AGAALVYEVQ RNARGEAKKE EKRQQELAEF RRKHEKMENE IEEMKQRCCL LHEELSKPIN EQPSKPLNEE VSKPRGLAWL YNYMCYQNAA EKIK |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)