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AT3G58060.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
vacuole 0.739
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data no PPI data
Description (TAIR10) protein_coding : Cation efflux family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Cation efflux family protein; FUNCTIONS IN: cation transmembrane transporter activity, efflux transmembrane transporter activity; INVOLVED IN: cation transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Cation efflux protein (InterPro:IPR002524); BEST Arabidopsis thaliana protein match is: Cation efflux family protein (TAIR:AT1G79520.2); Has 4333 Blast hits to 4329 proteins in 1671 species: Archae - 143; Bacteria - 3530; Metazoa - 46; Fungi - 247; Plants - 204; Viruses - 0; Other Eukaryotes - 163 (source: NCBI BLink).
Protein Annotations
eggNOG:COG0053eggNOG:KOG1485EMBL:AL132977EMBL:CP002686
EnsemblPlants:AT3G58060EnsemblPlants:AT3G58060.1entrez:824975Gene3D:1.20.1510.10
Gene3D:3.30.70.1350GeneID:824975Genevisible:Q9M2P2GO:GO:0005384
GO:GO:0009705GO:GO:0016021GO:GO:0035618GO:GO:0071421
Gramene:AT3G58060.1hmmpanther:PTHR11562hmmpanther:PTHR11562:SF45HOGENOM:HOG000205012
InParanoid:Q9M2P2InterPro:IPR002524InterPro:IPR027469InterPro:IPR027470
KEGG:ath:AT3G58060ncoils:CoilOMA:YVEVDIIPANTHER:PTHR11562
PaxDb:Q9M2P2Pfam:PF01545Pfam:PF16916Pfam:Q9M2P2
PhylomeDB:Q9M2P2PIR:T46028PRIDE:Q9M2P2PRO:PR:Q9M2P2
ProteinModelPortal:Q9M2P2Proteomes:UP000006548RefSeq:NP_191365.2SMR:Q9M2P2
STRING:3702.AT3G58060.1SUPFAM:0054606SUPFAM:SSF160240TAIR:AT3G58060
TIGRfam:TIGR01297TIGRFAMs:TIGR01297TMHMM:TMhelixUniGene:At.53975
UniProt:Q9M2P2
Coordinates (TAIR10) chr3:-:21497778..21499676
Molecular Weight (calculated) 46243.80 Da
IEP (calculated) 4.92
GRAVY (calculated) 0.05
Length 411 amino acids
Sequence (TAIR10)
(BLAST)
001: MEVNYCPETP LLSSNDHEAI DHKPKLTGMV SSMKSNFFAD LPQKLRSKID PENPLHLDVS KAAGLKEDEK EYYERQLATL KSFEEVESFL ARSDEYTIDE
101: KEEEEDRAER AAQELAMQIS NWANIFLLAL KIYATVKSGS IAIAASTLDS LLDLMAGGIL WFTHLSMKNV NIYKYPIGKL RVQPVGIIIF AAVMATLGFQ
201: VLLVAAEQLI SNEPSEKMNH VQLIWLYSIM LSATAIKLVL WIYCKSSRNH IVRAYAKDHH FDVVTNVLGL VAAVLANAFY WWLDPTGAIL LAIYTIVNWS
301: GTVMENAVSL IGQSAPPEVL QKLTYLVMRQ GGDNIKHVDT VRAYTFGVLY FVEVDIELPE DLPLKEAHAI GESLQIKLEE LPEVERAFVH LDFECHHKPE
401: HSVLSTIPND L
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)