AT3G57910.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : D111/G-patch domain-containing protein | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
D111/G-patch domain-containing protein; FUNCTIONS IN: nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: D111/G-patch (InterPro:IPR000467); BEST Arabidopsis thaliana protein match is: D111/G-patch domain-containing protein (TAIR:AT5G26610.3); Has 4544 Blast hits to 3364 proteins in 343 species: Archae - 10; Bacteria - 136; Metazoa - 2001; Fungi - 471; Plants - 301; Viruses - 43; Other Eukaryotes - 1582 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:+:21442771..21443968 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 30783.00 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 4.78 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -1.23 | ||||||||||||||||||||||||||||||||||||
| Length | 265 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MAESTRNLTG LGGEAAKEED DEYMGDLSQF IPQELSQTSK RKESEKKTVI VEPSRKKLKN LNWHERRRLE KERKQIEEDE QTLARIVDTP IGESNIGFKL 101: LKQMGYKPGS ALGKQGSGRA EPVTMDIRRS RAGVGREDPH KEKKKKEEIE AENEKRKVDE MLEDFGSRQK SQWRKKRVLI NFRKAKAALD QLENVEVVPE 201: KKNEEDEDGK PDEEEEEEEE ITEEDLQEIL MKLRAEHWYC LFCGFQYETT EALLSNCPGV NEDDH |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)