AT3G57740.1
|
Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.966 What is SUBAcon? |
|
||||||||||||||||||||||||||||||||||||
| Experimental Localisations and PPI |
|
||||||||||||||||||||||||||||||||||||
|
SUBAcon links
AGI-AGI relationships |
|
||||||||||||||||||||||||||||||||||||
| Description (TAIR10) | protein_coding : Protein kinase superfamily protein | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
|||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
Protein kinase superfamily protein; FUNCTIONS IN: protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G57750.2); Has 31135 Blast hits to 30839 proteins in 1583 species: Archae - 4; Bacteria - 2835; Metazoa - 4267; Fungi - 840; Plants - 21255; Viruses - 28; Other Eukaryotes - 1906 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
|
||||||||||||||||||||||||||||||||||||
| Coordinates (TAIR10) | chr3:+:21392671..21393744 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 41499.20 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.40 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.30 | ||||||||||||||||||||||||||||||||||||
| Length | 357 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MSCWRKKSKK KNSEANQRQR WFQENGKVLL EDLIELCNGK SNPIKTFSAE EILQATDNFS ESNLVIRFNF MYRGILQNRP VLIKRATWNY YKSDTLEKIC 101: RDIAVSSMVS GHKNFLKLLG CCLEFEHPVL VCEYAERIPF NTPNPEMLLP WRMRIKIAKE IAIAVSYLHT ALSRTMIHTD IQPFNIFVDS NGTAKLSDFC 201: LCIAIPEGET FVKVHADRVE GTLDYLEYNY AATGLITEYT DVFSFGVLLQ NFFTRTYGVV DCCCSEDESL FEEFEDKQNV MNLRISDRIS KFVEEGRIFD 301: MLDPKMLESM GDDETEEHKI RRMKAVLMLS LRCTGHRGDV PKMMEVAKEL KRIERWT |
||||||||||||||||||||||||||||||||||||
| See Also |
|
||||||||||||||||||||||||||||||||||||
Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)