AT3G57720.1
|
Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.997 What is SUBAcon? |
|||||||||||||||||||||||||||||||||
| Experimental Localisations and PPI |
|
||||||||||||||||||||||||||||||||
|
SUBAcon links
AGI-AGI relationships |
|
||||||||||||||||||||||||||||||||
| Description (TAIR10) | protein_coding : Protein kinase superfamily protein | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
|||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
Protein kinase superfamily protein; FUNCTIONS IN: protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G57730.1); Has 54825 Blast hits to 54362 proteins in 2398 species: Archae - 40; Bacteria - 6527; Metazoa - 13539; Fungi - 2973; Plants - 25185; Viruses - 100; Other Eukaryotes - 6461 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
|
||||||||||||||||||||||||||||||||
| Coordinates (TAIR10) | chr3:+:21387766..21388845 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 41038.90 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 8.44 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.16 | ||||||||||||||||||||||||||||||||
| Length | 359 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MKSMVKKLKQ SLRSGSLEKR KEKEKDIQEE KWFLDNGSIF LKELIADCNG KSIPIRNFSS DQILKATSNF GSSCFVTAEG FYVWYKGIIE DRSYMIKRFS 101: EYKVTQYRVA EVYNEIVLSA RMSNHNNFLK LIGFCLEFSL PVLVFEYAEH GVLNHRGGVI VNGEEVILPL SLRLKIGKEI ANAVTYLHMA FPKILIHRHI 201: KPRNVFLDEN WTPKLSDFSI SINLPEGKSR IEVECVQGTI GYLDPVYYTT KMVTEYTDVY SFGVFLMVIL TGKPALASTS SDGDYKHIAS YVKGFHENGQ 301: LDGVIDPKVM EDITSAQKVH VEACVVLALR CCELRDENRP KMIQIAKELK QIETLFRRS |
||||||||||||||||||||||||||||||||
| See Also |
|
||||||||||||||||||||||||||||||||
Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)