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AT3G57650.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
endoplasmic reticulum 1.000
ASURE: endoplasmic reticulum
What is SUBAcon?
Predictors External Curations
AmiGO : endoplasmic reticulum 15772283
AmiGO : endoplasmic reticulum 16618929
SwissProt : endoplasmic reticulum 16381842
TAIR : endoplasmic reticulum 15772283
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31615849 (2019): plastid plastid thylakoid
  • PMID:31520498 (2020): mitochondrion
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:26781341 (2016): plasma membrane
  • PMID:25900983 (2015): Golgi Golgi apparatus Golgi membrane
  • PMID:25900983 (2015): Golgi trans-Golgi network
  • PMID:25641898 (2015): plasma membrane
  • PMID:22923678 (2012): endoplasmic reticulum
  • PMID:19334764 (2009): plasma membrane
  • PMID:16618929 (2006): endoplasmic reticulum
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : lysophosphatidyl acyltransferase 2
Curator
Summary (TAIR10)
Encodes an endoplasmic reticulum localized protein with lysophosphatidyl acyltransferase activity.
Computational
Description (TAIR10)
lysophosphatidyl acyltransferase 2 (LPAT2); FUNCTIONS IN: 1-acylglycerol-3-phosphate O-acyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Phospholipid/glycerol acyltransferase (InterPro:IPR002123); BEST Arabidopsis thaliana protein match is: lysophosphatidyl acyltransferase 3 (TAIR:AT1G51260.1); Has 1646 Blast hits to 1643 proteins in 516 species: Archae - 0; Bacteria - 639; Metazoa - 536; Fungi - 213; Plants - 138; Viruses - 2; Other Eukaryotes - 118 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT3G57650-MONOMERBioGrid:10249BRENDA:2.3.1.51EC:2.3.1.51
eggNOG:COG0204eggNOG:KOG1505EMBL:AL049660EMBL:AY084461
EMBL:CP002686EnsemblPlants:AT3G57650EnsemblPlants:AT3G57650.1entrez:824934
ExpressionAtlas:Q8LG50GeneID:824934Genevisible:Q8LG50GO:GO:0003841
GO:GO:0005783GO:GO:0005789GO:GO:0007275GO:GO:0016021
GO:GO:0016024Gramene:AT3G57650.1gramene_pathway:2.3.1.51gramene_pathway:PWY-5667
gramene_pathway:PWY0-1319gramene_pathway:TRIGLSYN-PWYhmmpanther:PTHR10983hmmpanther:PTHR10983:SF23
HOGENOM:HOG000006110InParanoid:Q8LG50InterPro:IPR002123InterPro:IPR032098
KEGG:00561+2.3.1.51KEGG:00564+2.3.1.51KEGG:ath:AT3G57650KO:K13523
OMA:IINTVQCPaxDb:Q8LG50Pfam:PF01553Pfam:PF16076
Pfam:Q8LG50PIR:T06755PRIDE:Q8LG50PRO:PR:Q8LG50
ProteinModelPortal:Q8LG50Proteomes:UP000006548Reactome:R-ATH-1483166Reactome:R-ATH-75109
RefSeq:NP_567052.1SMART:SM00563STRING:3702.AT3G57650.1SUPFAM:0039877
TAIR:AT3G57650tair10-symbols:LPAT2TMHMM:TMhelixUniGene:At.34815
UniPathway:UPA00557UniProt:Q147Q7UniProt:Q8LG50
Coordinates (TAIR10) chr3:+:21349751..21352839
Molecular Weight (calculated) 43678.40 Da
IEP (calculated) 9.72
GRAVY (calculated) 0.10
Length 389 amino acids
Sequence (TAIR10)
(BLAST)
001: MVIAAAVIVP LGLLFFISGL AVNLFQAVCY VLIRPLSKNT YRKINRVVAE TLWLELVWIV DWWAGVKIQV FADNETFNRM GKEHALVVCN HRSDIDWLVG
101: WILAQRSGCL GSALAVMKKS SKFLPVIGWS MWFSEYLFLE RNWAKDESTL KSGLQRLSDF PRPFWLALFV EGTRFTEAKL KAAQEYAASS ELPIPRNVLI
201: PRTKGFVSAV SNMRSFVPAI YDMTVTIPKT SPPPTMLRLF KGQPSVVHVH IKCHSMKDLP ESDDAIAQWC RDQFVAKDAL LDKHIAADTF PGQQEQNIGR
301: PIKSLAVVLS WACVLTLGAI KFLHWAQLFS SWKGITISAL GLGIITLCMQ ILIRSSQSER STPAKVVPAK PKDNHHPESS SQTETEKEK
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)