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AT3G57110.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plastid 0.980
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G60370.1); Has 16 Blast hits to 16 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 16; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG4111IIDeggNOG:KOG4760EMBL:AL138655EMBL:AY954852
EMBL:CP002686EnsemblPlants:AT3G57110EnsemblPlants:AT3G57110.1entrez:824878
GeneID:824878Gramene:AT3G57110.1hmmpanther:PTHR14464KEGG:ath:AT3G57110
PIR:T47771Proteomes:UP000006548RefSeq:NP_191270.1TAIR:AT3G57110
UniGene:At.53963UniProt:Q9M1I9
Coordinates (TAIR10) chr3:+:21134924..21135334
Molecular Weight (calculated) 14687.70 Da
IEP (calculated) 6.96
GRAVY (calculated) 0.20
Length 136 amino acids
Sequence (TAIR10)
(BLAST)
001: MAESPSESTS ALLSTTTSTK PAQSGTVSIS SPQSHHVVFP EIPIEIINEE EIVILDAALA ASHSILPSVI RSVSPSQMIA GGSPITIRSI TLFSKRKLSA
101: CLYIEESYLH RFRRNQSLGV TDLTGTVRLF YITVIS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)