AT3G57100.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.751 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Protein of unknown function (DUF677) | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Protein of unknown function (DUF677); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF677 (InterPro:IPR007749); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF677) (TAIR:AT4G34320.1); Has 123 Blast hits to 123 proteins in 12 species: Archae - 2; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 116; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:-:21133256..21134335 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 40996.70 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 8.72 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.32 | ||||||||||||||||||||||||||||||||||||
| Length | 359 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MKFCNPFLRL ILRRKPISMI SPTMFLLSSP TTSSSIGHSN GMLRSRSEDN LNKLGECMDN MDEDVSKLFI EFQQTDLRED PDLFRLLNHY FTTSKGVSQL 101: CESLRTCLER SENNECLLLD EALVDFELEK LGYGGSLEEA SFRKTYRDLR NFNAFYNNNS GEEDDLDYCE FLRKFQTCHE ELAKMVVKLE KTMKDIDKKL 201: RRVRGRRAIV TAALLAPVIA VIFLSKLVAG LVPIEGLSTF VASRWRKSTE SLKREKTAMS SMERGIIVAL KQVEKISKLV SRLESVERSI SLTAEFAVKK 301: RSSVVVAMRE VEEERKRLKS TLVDLDRETG LCNGFAQFGR TVALEKITEF LSRGDKSSK |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)