AT3G56700.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plastid 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : fatty acid reductase 6 | ||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
fatty acid reductase 6 (FAR6); FUNCTIONS IN: fatty-acyl-CoA reductase (alcohol-forming) activity, oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor; INVOLVED IN: microsporogenesis, metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: inflorescence meristem, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Male sterility (InterPro:IPR004262), NAD(P)-binding domain (InterPro:IPR016040), Male sterility, NAD-binding (InterPro:IPR013120); BEST Arabidopsis thaliana protein match is: Jojoba acyl CoA reductase-related male sterility protein (TAIR:AT3G11980.1); Has 2302 Blast hits to 2276 proteins in 434 species: Archae - 2; Bacteria - 606; Metazoa - 984; Fungi - 228; Plants - 282; Viruses - 0; Other Eukaryotes - 200 (source: NCBI BLink). | ||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:-:20999731..21002058 | ||||||||||||
| Molecular Weight (calculated) | 59238.20 Da | ||||||||||||
| IEP (calculated) | 8.20 | ||||||||||||
| GRAVY (calculated) | -0.28 | ||||||||||||
| Length | 527 amino acids | ||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MATTNVLATS HAFKLNGVSY FSSFPRKPNH YMPRRRLSHT TRRVQTSCFY GETSFEAVTS LVTPKTETSR NSDGIGIVRF LEGKSYLVTG ATGFLAKVLI 101: EKLLRESLEI GKIFLLMRSK DQESANKRLY DEIISSDLFK LLKQMHGSSY EAFMKRKLIP VIGDIEEDNL GIKSEIANMI SEEIDVIISC GGRTTFDDRY 201: DSALSVNALG PAYVTGKREG TVLETPLCIG ENITSDLNIK SELKLASEAV RKFRGREEIK KLKELGFERA QHYGWENSYT FTKAIGEAVI HSKRGNLPVV 301: IIRPSIIESS YNEPFPGWIQ GTRMADPIIL AYAKGQISDF WADPQSLMDI IPVDMVANAA IAAMAKHGCG VPEFKVYNLT SSSHVNPMRA GKLIDLSHQH 401: LCDFPLEETV IDLEHMKIHS SLEGFTSALS NTIIKQERVI DNEGGGLSTK GKRKLNYFVS LAKTYEPYTF FQARFDNTNT TSLIQEMSME EKKTFGFDIK 501: GIDWEHYIVN VHLPGLKKEF LSKKKTE |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)