AT3G54970.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:mitochondrion 0.683 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily protein | ||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aminotransferase, class IV (InterPro:IPR001544); Has 125 Blast hits to 125 proteins in 56 species: Archae - 2; Bacteria - 46; Metazoa - 0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 29 (source: NCBI BLink). | ||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:-:20368329..20370070 | ||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 39538.70 Da | ||||||||||||||||||||||||||||
| IEP (calculated) | 7.50 | ||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.15 | ||||||||||||||||||||||||||||
| Length | 353 amino acids | ||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MSNCRFLYHN GVVLEAPPVT TFLESHTGAY TTTRTINNGT SFLFWERHMK RLSSSIRILL KSNPELLFSS GSSPRFWMNQ PVPGSSIYDR VNGSMSEALK 101: SVVVKESERL YGEELAVTVL VTGNVEKLNR LDVGNNWDFL DVWLHIGAYS PLGPLGVGEN AASLALVGRG RDVAAAKYSD WVRLRKPLEK FRPPLTTELL 201: LSNDGDHLLE GCITNFFVVC RRVKSSENLY GGSLSEFEVQ TAPITDGVLA GVIRDLVIEV CLSEGIPYRE RAPSWSEREL WEEAFITSSL RILQHVGTIK 301: VPVGSMEGLA CNKPEEIQWK EKRFKERPGM ITELIKKAIM ERGIKEGFPL KAF |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)