AT3G54760.2
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 0.999 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : dentin sialophosphoprotein-related | ||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
dentin sialophosphoprotein-related; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol; EXPRESSED IN: guard cell; BEST Arabidopsis thaliana protein match is: Tudor/PWWP/MBT superfamily protein (TAIR:AT5G02950.1). | ||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:-:20269659..20272037 | ||||||||||||||||||||||||
| Molecular Weight (calculated) | 82758.60 Da | ||||||||||||||||||||||||
| IEP (calculated) | 4.10 | ||||||||||||||||||||||||
| GRAVY (calculated) | -0.88 | ||||||||||||||||||||||||
| Length | 761 amino acids | ||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MEEPREESEA VRDCSEPMEE AGKGSGLSSK TETLVDEDAN TDLGVSDKNP NDGGLATVDV DDDDDVKRTD AVTEIECEGD TGTVEVKLND ETAKSEVKSK 101: SGATHETAGE EETENSVANE ATDEKATCEV EDNGGVCDAE QDVETENFQL NPVHGETLSV AEDKADQEKE TTKKIEKDIN EMEVDSKQED EENETEDAKH 201: SESAQVPEES TKLSKEETDE ENQKEENGVA MEIDGVAGEH VEKVVKVGSG SDNACNESAG ASMVQTQDVP IAEADNNESN VVKKMEIDER KDNADMTSDL 301: TGTIESADSA IPNSPTEDAA PGNIQDLKTE TGNVSLKEDK KVTDMAEDVV TADIETESNE ARVGVGAESP AAATDCSKET SDATLGSEEN QQDKDHQCLD 401: KKTADVQDTM IEEDDITHEA PSFDPNQKEN AEMEENHNNF VYADDEAGSD VKTNGVKRKA DVLSEDSPGE GRKTVSFAKV SFAERPSFKI GACIARAASQ 501: MAGSPSVLKG SNFGDETLSV ESFVSQLHCA ATDPVKENVV SDIATGFFLD FRNSSASQQV TTEKVSKKRG RPSNSNVAGT EAFEFEEMGD TYWTDRVIHN 601: GGEGQTPATE KGNYQVVPVE LKPAQVQRTR RPYRRRQSQI SIPHSATKKP ADIDENAPAE IIMNFFETDT IPPEKSLSKM FRHFGPIQEL RTEVDREKNR 701: ARVVFRKGAD AEVAYNSAGR FNIFGTKVVK YELSRNVTET FKVQPYVVSL AEEDAAVCPS S |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)