AT3G53305.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:endoplasmic reticulum 0.934 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : cytochrome P450, family 71, subfamily B, polypeptide 32 | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
putative cytochrome P450 | ||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
cytochrome P450, family 71, subfamily B, polypeptide 32 (CYP71B32); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group IV (InterPro:IPR002403), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 71, subfamily B, polypeptide 8 (TAIR:AT5G35715.1); Has 26833 Blast hits to 23353 proteins in 1294 species: Archae - 41; Bacteria - 1874; Metazoa - 9434; Fungi - 3399; Plants - 11336; Viruses - 3; Other Eukaryotes - 746 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:+:19763618..19765268 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 38270.20 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.26 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.20 | ||||||||||||||||||||||||||||||||||||||||
| Length | 338 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MLLRFGVVPV VVFSSKEAAK EVLKTHDLDT CTRPKLVANG LFSRNFKDIG FTQYGEDWRE MKKLVGLELF SPKKHKSFRY IREEEGDLLV KKISNSAQTQ 101: TLIDLRKASF SFTAGTIFRL AFGQNFHQCD FMDMDRLEEL VLEAETNGCI LALTDFLPTG LGWLVDRISG CGFGGSECGN NHNDLQKVEY LNMVIKETFR 201: LHPPSPLLLP RETMSDIEIQ GYHIPKNALI RINTYTIGRD LKCWSNPERF LNTSINYKGQ DYKLLPFGAG RRSCPGMNLG ITILELGLLN ILYFFDWSFP 301: NGMTIEDIDM EENGALNKTL ELIPTLPSAL SDGSSGWR |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)