AT3G53300.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:extracellular 0.943 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : cytochrome P450, family 71, subfamily B, polypeptide 31 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
putative cytochrome P450 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
cytochrome P450, family 71, subfamily B, polypeptide 31 (CYP71B31); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; EXPRESSED IN: sepal, male gametophyte, carpel, stamen; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 71, subfamily B, polypeptide 8 (TAIR:AT5G35715.1); Has 33337 Blast hits to 33066 proteins in 1704 species: Archae - 47; Bacteria - 3382; Metazoa - 11974; Fungi - 7117; Plants - 9588; Viruses - 3; Other Eukaryotes - 1226 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:+:19760525..19762234 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 57146.80 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 7.75 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.19 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 498 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MSMFLGLLFL FPLFFILFKN LLPPRKKLPP GPTGLPLIGN LHQLGRLLHS SLHKLSLEHG PVMLVRWGVV PMAVFSSNEA AKEVLKTHDL ETCNRPKLVA 101: NGLFTHGYKD IGFTQYGEEW REMKKFVGLE LFSPKKHKSF RYIREEEGDL LVKKISNYAQ TQTLVDLRKS LFSYTASIIF REAFGQNFRE CDYINMDKLE 201: ELVQETETNV CSLAFTDFFP RGLGWLVDRI SGQHSRMNIA FSKLTTFFED VIDELLKTKQ LDDHSDLVTA MLDVINRPRK FGSLKITYDH LIAMMSDVVL 301: AGVNAGTVTM IWTMTELTRH PRVMKKLQEE IRATLGPNKE RITEEDLEKV EYLNLVIKES FRLHPPAPLL LPRETMSDIE IQGYHIPKNA HVKINTYAIG 401: RDPKRWTNPE EFNPERFLNT SINYKGQHYE LLPFGAGRRN CPGMTLGITI LELGLLNILY YFDWSLPSGM TIKDIDMEED GALNIAKKVP LQLVPTLP |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)