AT3G52970.1
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:endoplasmic reticulum 0.931 What is SUBAcon? |
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Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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Description (TAIR10) | protein_coding : cytochrome P450, family 76, subfamily G, polypeptide 1 | ||||||||||||||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
member of CYP76G | ||||||||||||||||||||||||||||||||||||||||
Computational Description (TAIR10) |
cytochrome P450, family 76, subfamily G, polypeptide 1 (CYP76G1); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: stem, root; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 76, subfamily C, polypeptide 4 (TAIR:AT2G45550.1); Has 32424 Blast hits to 32109 proteins in 1620 species: Archae - 56; Bacteria - 3024; Metazoa - 11864; Fungi - 7038; Plants - 9393; Viruses - 3; Other Eukaryotes - 1046 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
Protein Annotations |
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Coordinates (TAIR10) | chr3:-:19641400..19643259 | ||||||||||||||||||||||||||||||||||||||||
Molecular Weight (calculated) | 58827.40 Da | ||||||||||||||||||||||||||||||||||||||||
IEP (calculated) | 8.54 | ||||||||||||||||||||||||||||||||||||||||
GRAVY (calculated) | -0.23 | ||||||||||||||||||||||||||||||||||||||||
Length | 516 amino acids | ||||||||||||||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: MINQLTKNEL IGLFTSIAVL IYVTCLFYTK RCRTRLPPGP NPWPVIGNIF QLAGLPPHDS LTKLSRRHGP IMTLRIGSML TVVISSSEVA REIFKKHDAA 101: LAGRKIYEAM KGGKSSDGSL ITAQYGAYWR MLRRLCTTQF FVTRRLDAMS DVRSRCVDQM LRFVEEGGQN GTKTIDVGRY FFLMAFNLIG NLMFSRDLLD 201: PDSKRGSEFF YHTGKVMEFA GKPNVADFFP LLRFLDPQGI RRKTQFHVEK AFEIAGEFIR ERTEVREREK SDEKTKDYLD VLLEFRGGDG VDEEPSSFSS 301: RDINVIVFEM FTAGTDTTTS TLEWALAELL HNPRTLTKLQ TELRTYFKSS NQKLQEEDLP NLPYLSAVIM ETLRLHPPLP FLVPHKAMST CHIFDQYTIP 401: KETQVLVNVW AIGRDPKTWI DPIMFKPERF ISDPDARDFK GQDYEFLPFG SGRRMCPALP LASRVLPLAI GSMVRSFDWA LENGLNAEEM DMGERIGITL 501: KKAVPLEAIP IPYRGT |
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See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)