AT3G52600.2
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:vacuole 0.479 extracellular 0.278 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : cell wall invertase 2 | ||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
cell wall invertase 2 (CWINV2); FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 32 (InterPro:IPR001362), Glycosyl hydrolases family 32, N-terminal (InterPro:IPR013148), Glycosyl hydrolase family 32, C-terminal (InterPro:IPR013189), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: cell wall invertase 4 (TAIR:AT2G36190.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:-:19507080..19508833 | ||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 59372.40 Da | ||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 9.51 | ||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.56 | ||||||||||||||||||||||||||||||||||||||||||||
| Length | 524 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MLYKGVYHLF YQYNPKGAVW GNIVWAHSVS KDLINWEALE PAIYPSKWFD INGTWSGSAT HVPGKGPVIL YTGITENQTQ IQNYAIPQDL SDPYLKTWIK 101: PDDNPIVKPD NGENGSAFRD PTTAWFNKKD GYWRMLVGSK RKNRGIAYMY KSRDFKKWVK SKRPIHSRKK TGMWECPDFF PVSVTDKKNG LDFSYDGPNA 201: KHVLKVSLDL TRYEYYTLGT YDTKKDRYRP DGYTPDGWDG LRFDYGNYYA SKTFFDDKTN RRILWGWANE SDTVQDDTVK GWAGIQLIPR TILLDSSGKQ 301: LVFWPIEEIE SLRGKNVQMT NQKMEMGQRF EVQGITPAQV DVDVTFNVGN LEKAEKFDES FATKPLELCN LKGSNVNGGV GPFGLITLAT SDLEEYTPVF 401: FRVFKDAASN KPKVLMCSDA KPSSLKKDTG TDAKERMYKP SFAGFVDVGL LDGKISLRSL IDHSVVESFG AKGKTVITSR VYPTKAVGEK AHLFVFNNGS 501: QPVTVESLNA WNMQKPLKMN QGAK |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)