AT3G52200.2
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:mitochondrion 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Dihydrolipoamide acetyltransferase, long form protein | ||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
dihydrolipoamide S-acetyltransferase (LTA3) mRNA, nuclear | ||||||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
LTA3; FUNCTIONS IN: dihydrolipoyllysine-residue acetyltransferase activity; INVOLVED IN: pyruvate metabolic process, metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 2-oxo acid dehydrogenase, lipoyl-binding site (InterPro:IPR003016), Dihydrolipoamide acetyltransferase, long form (InterPro:IPR006257), E3 binding (InterPro:IPR004167), 2-oxoacid dehydrogenase acyltransferase, catalytic domain (InterPro:IPR001078), Single hybrid motif (InterPro:IPR011053), Biotin/lipoyl attachment (InterPro:IPR000089); BEST Arabidopsis thaliana protein match is: Dihydrolipoamide acetyltransferase, long form protein (TAIR:AT1G54220.2). | ||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:+:19360317..19366091 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 77898.60 Da | ||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.09 | ||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.17 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 713 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MVLPLFRRAA IARTSSLLRA RLFAPASEFH SRFSNGLYHL DDKISSSNGV RSASIDLITR MDDSSPKPIL RFGVQNFSST AIRLTNTDVK WVIRIINGNF 101: RLTCRKIEML IDAGAKTSIS LFSLMFVLPS YLRYSDRRCN QLYKILPLNY YFLWVVGPIS QTVLAMPALS PTMSHGNVVK WMKKEGDKVE VGDVLCEIET 201: DKATVEFESQ EEGFLAKILV TEGSKDIPVN EPIAIMVEEE DDIKNVPATI EGGRDGKEET SAHQVMKPDE STQQKSSIQP DASDLPPHVV LEMPALSPTM 301: NQGNIAKWWK KEGDKIEVGD VIGEIETDKA TLEFESLEEG YLAKILIPEG SKDVAVGKPI ALIVEDAESI EAIKSSSAGS SEVDTVKEVP DSVVDKPTER 401: KAGFTKISPA AKLLILEHGL EASSIEASGP YGTLLKSDVV AAIASGKASK SSASTKKKQP SKETPSKSSS TSKPSVTQSD NNYEDFPNSQ IRKIIAKRLL 501: ESKQKIPHLY LQSDVVLDPL LAFRKELQEN HGVKVSVNDI VIKAVAVALR NVRQANAFWD AEKGDIVMCD SVDISIAVAT EKGLMTPIIK NADQKSISAI 601: SLEVKELAQK ARSGKLAPHE FQGGTFSISN LGMYPVDNFC AIINPPQAGI LAVGRGNKVV EPVIGLDGIE KPSVVTKMNV TLSADHRIFD GQVGASFMSE 701: LRSNFEDVRR LLL |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)