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AT3G51200.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
cytosol 0.866
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data no PPI data
Description (TAIR10) protein_coding : SAUR-like auxin-responsive protein family
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT5G66260.1); Has 1174 Blast hits to 1162 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1173; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410JUZEeggNOG:ENOG41106DPEMBL:AL132980EMBL:CP002686
EnsemblPlants:AT3G51200EnsemblPlants:AT3G51200.1entrez:824283GeneID:824283
GO:GO:0009733Gramene:AT3G51200.1hmmpanther:PTHR31374hmmpanther:PTHR31374:SF41
HOGENOM:HOG000238628InterPro:IPR003676KEGG:ath:AT3G51200KO:K14488
OMA:TIPCDQNPfam:PF02519PhylomeDB:Q9SD26PIR:T45751
Proteomes:UP000006548RefSeq:NP_190688.1TAIR:AT3G51200UniGene:At.65272
UniProt:Q9SD26
Coordinates (TAIR10) chr3:-:19018853..19019173
Molecular Weight (calculated) 12311.80 Da
IEP (calculated) 9.57
GRAVY (calculated) -0.62
Length 106 amino acids
Sequence (TAIR10)
(BLAST)
001: MEIKEASKTQ RERRGASSLK QMLMKRCSSF VKKSNEEDVP KKGYFAVYVG HFRDRHVIPI TSLNHPTFKM MLQKSEEEFG FRQESGLTIP CDQNTFLTLL
101: DSITSY
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)