AT3G50730.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.977 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Protein kinase superfamily protein | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase, ATN1-like (InterPro:IPR015784), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G50720.1); Has 124533 Blast hits to 123091 proteins in 4731 species: Archae - 161; Bacteria - 14729; Metazoa - 47162; Fungi - 10974; Plants - 32228; Viruses - 465; Other Eukaryotes - 18814 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:-:18851533..18853137 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 42429.60 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 8.56 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.33 | ||||||||||||||||||||||||||||||||||||
| Length | 371 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MISRMIFRNY PSHNESDDEP FHFSISRELL LDRNDVVVGE MIGEGAYSIV YKGLLRNQFP VAVKIMDPST TSAVTKAHKK TFQKEVLLLS KMKHDNIVKF 101: VGACIEPQLI IVTELVEGGT LQRFMHSRPG PLDLKMSLSF ALDISRAMEF VHSNGIIHRD LNPRNLLVTG DLKHVKLADF GIAREETRGG MTCEAGTSKW 201: MAPEVVYSPE PLRVGEKKEY DHKADIYSFA IVLWQLVTNE EPFPDVPNSL FVPYLVSQGR RPILTKTPDV FVPIVESCWA QDPDARPEFK EISVMLTNLL 301: RRMSSDSSIG TTLPDGEAYE GEMEESENSP LLQEHFCKVK KPKEKKKKKK LVKMRFPFFK KFKVWLYNYK P |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)